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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: METC_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSLSLHSS FVPSFADLSD RGLISKNSPT SVSISKVPTW EKKQISNRNS FKLNCVMEKS  60
   61 VDGQTHSTVN NTTDSLNTMN IKEEASVSTL LVNLDNKFDP FDAMSTPLYQ TATFKQPSAI 120
  121 ENGPYDYTRS GNPTRDALES LLAKLDKADR AFCFTSGMAA LSAVTHLIKN GEEIVAGDDV 180
  181 YGGSDRLLSQ VVPRSGVVVK RVNTTKLDEV AAAIGPQTKL VWLESPTNPR QQISDIRKIS 240
  241 EMAHAQGALV LVDNSIMSPV LSRPLELGAD IVMHSATKFI AGHSDVMAGV LAVKGEKLAK 300
  301 EVYFLQNSEG SGLAPFDCWL CLRGIKTMAL RIEKQQENAR KIAMYLSSHP RVKKVYYAGL 360
  361 PDHPGHHLHF SQAKGAGSVF SFITGSVALS KHLVETTKYF SIAVSFGSVK SLISMPCFMS 420
  421 HASIPAEVRE ARGLTEDLVR ISAGIEDVDD LISDLDIAFK TFPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle