YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DGK1_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDDGELGMF FPSWTSKNPI DTVESRGLMF SCFVAALVGI LTIAYTAFQW RRNINLSWTK  60
   61 AIARSKKNPK ARHKVPVAPH SWELDPIARA KNLNCCVCLK SMSPSQAIVA SESFFHRCTI 120
  121 CGAAAHFNCS SSAPKDCKCV SMVGFEHVVH QWAVRWTEGA DQTDDSSFCS YCDESCSSSF 180
  181 LGGSPIWCCL WCQRLVHVDC HSNMSNETGD ICDLGPLRRL ILCPLYVKEL TRNPSGGFLS 240
  241 SITHGANELA STALASIRIQ SKKYKQTNET SADTGNSGSN CDESTESTAD TGPTVNGAHA 300
  301 VLENSISVMN GDSSNGDSDS NGKLEKKPSV KRTGSFGQKE YHALRSKLKY ELADLPSDAR 360
  361 PLLVFINKKS GAQRGDSLRQ RLHLHLNPVQ VFELSSVQGP EVGLFLFRKV PHFRVLVCGG 420
  421 DGTAGWVLDA IEKQNFISPP AVAILPAGTG NDLSRVLNWG GGLGSVERQG GLSTVLQNIE 480
  481 HAAVTVLDRW KVSILNQQGK QLQPPKYMNN YIGVGCDAKV ALEIHNLREE NPERFYSQFM 540
  541 NKVLYAREGA RSIMDRTFED FPWQVRVEVD GVDIEVPEDA EGILVANIGS YMGGVDLWQN 600
  601 EDETYENFDP QSMHDKIVEV VSISGTWHLG KLQVGLSRAR RLAQGSAVKI QLCAPLPVQI 660
  661 DGEPWNQQPC TLTISHHGQA FMLKRAAEEP LGHAAAIITD VLENAETNQV INASQKRTLL 720
  721 QEMALRLT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle