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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HEMH1_ARATH
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQATALSSGF NPLTKRKDHR FPRSCSQRNS LSLIQCDIKE RSFGESMTIT NRGLSFKTNV  60
   61 FEQARSVTGD CSYDETSAKA RSHVVAEDKI GVLLLNLGGP ETLNDVQPFL YNLFADPDII 120
  121 RLPRPFQFLQ GTIAKFISVV RAPKSKEGYA AIGGGSPLRK ITDEQADAIK MSLQAKNIAA 180
  181 NVYVGMRYWY PFTEEAVQQI KKDKITRLVV LPLYPQYSIS TTGSSIRVLQ DLFRKDPYLA 240
  241 GVPVAIIKSW YQRRGYVNSM ADLIEKELQT FSDPKEVMIF FSAHGVPVSY VENAGDPYQK 300
  301 QMEECIDLIM EELKARGVLN DHKLAYQSRV GPVQWLKPYT DEVLVDLGKS GVKSLLAVPV 360
  361 SFVSEHIETL EEIDMEYREL ALESGVENWG RVPALGLTPS FITDLADAVI ESLPSAEAMS 420
  421 NPNAVVDSED SESSDAFSYI VKMFFGSILA FVLLLSPKMF HAFRNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle