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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR28_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPKKNNNTF LSYFVCLFLL LEVGLGQNQI SEIKVGVVLD LNTTFSKICL TSINLALSDF  60
   61 YKDHPNYRTR LALHVRDSMK DTVQASAAAL DLIQNEQVSA IIGPIDSMQA KFMIKLANKT 120
  121 QVPTISFSAT SPLLTSIKSD YFVRGTIDDS YQVKAIAAIF ESFGWRSVVA IYVDNELGEG 180
  181 IMPYLFDALQ DVQVDRSVIP SEANDDQILK ELYKLMTRQT RVFVVHMASR LASRIFEKAT 240
  241 EIGMMEEGYV WLMTNGMTHM MRHIHHGRSL NTIDGVLGVR SHVPKSKGLE DFRLRWKRNF 300
  301 KKENPWLRDD LSIFGLWAYD STTALAMAVE KTNISSFPYN NASGSSNNMT DLGTLHVSRY 360
  361 GPSLLEALSE IRFNGLAGRF NLIDRQLESP KFEIINFVGN EERIVGFWTP SNGLVNVNSN 420
  421 KTTSFTGERF GPLIWPGKST IVPKGWEIPT NGKKIKVGVP VKKGFFNFVE VITDPITNIT 480
  481 TPKGYAIDIF EAALKKLPYS VIPQYYRFES PDDDYDDLVY KVDNGTLDAV VGDVTITAYR 540
  541 SLYADFTLPY TESGVSMMVP VRDNENKNTW VFLKPWGLDL WVTTACFFVL IGFVVWLFEH 600
  601 RVNTDFRGPP HHQIGTSFWF SFSTMVFAHR EKVVSNLARF VVVVWCFVVL VLTQSYTANL 660
  661 TSFLTVQRFQ PAAINVKDLI KNGDYVGYQH GAFVKDFLIK EGFNVSKLKP FGSSEECHAL 720
  721 LSNGSISAAF DEVAYLRAIL SQYCSKYAIV EPTFKTAGFG FAFPRNSPLT GDVSKAILNV 780
  781 TQGDEMQHIE NKWFMKQNDC PDPKTALSSN RLSLRSFWGL FLIAGIASFL ALLIFVFLFL 840
  841 YENRHTLCDD SEDSIWRKLT SLFRNFDEKD IKSHTFKSSA VHHVSSPMTQ YIPSPSTLQI 900
  901 APRPHSPSQD RAFELRRVSF TPNEERLTTQ TIHFEDEESD IECVVEQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle