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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR14_ARATH
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.31
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENCMIRNTG YFLTIFFLAF ISFAVTCSGT NQKDNVDRLP VVYEDVRIGL VVDMGSMEGK  60
   61 LVTTSISMAL SDFYHVNNGY RTRVSVLSRD SHGDPLQALA AAMDLLQTEQ VEALVGGQSL 120
  121 LEAKNLAELG EKTKVPVISS FQVPSSLSLA KYNYFIQATH DTSSEAKGIA ALFSNFDWRT 180
  181 AVLIYEDDDD WRESIQPLVG HFQQNAIHIE YKAEFSVSSN EECIMKQLRK FKASGIRIFV 240
  241 AHISERIANR LFPCARRLGM MEEGYAWILT ARSMNNFQDT NYLAKEEMEG VIGFKSYIPL 300
  301 TEELHNFTLR WKRSLRLEEV VTRMSVCSIW AHDIAWSLAR AAEVAKLPGL SVYDLLEAIP 360
  361 ESAKHKGLSG DIKFIDKKFI SDKFEIVNMI GRGERSVGLW NSGSFISNRR RRLSSTKALE 420
  421 TIIWPGGSTR IPKIRSLKEK RHGKKKKLRV LVPAGNITPQ ILEVKTDFKT GVTAATGYCI 480
  481 DVFETSILPF NYEVEYIPWP GAINYKNYND LVYTLYSQKD KYDAAVGDIT ITDNRSLYVD 540
  541 FTLPFTDMGL AVVTAKDKSM WIIFKPLTLS LWLTIASFFI LTGAIVWLIE RHDNADFQGS 600
  601 CFQQIGTLLC FGFSTLVFAH RERLQHNMSR FVVIVWIFAV LILTSNYTAT LTSVMTVQQI 660
  661 RGLKSNENIG FFSASIAANV VNDNPTFQGP RYKGLKTADD FTNALRNGTI SFIVDEVPYV 720
  721 KLFVAKHPSE FVIVETESVT NGFGFAFQKG SPLVQKVSRE IEKLRRTEKL KAIENWWFQR 780
  781 QTTSATSEDT FHPLTVYTFR GLFMITGVSF AFALIVYLIP WNREQRQVVL KHFHRYVSHR 840
  841 FAREIRPSPT TPNRQNENSV I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle