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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GAUT9_ARATH
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVAFRGGRG GVGSGQSTGL RSFFSYRIFI SALFSFLFLA TFSVVLNSSR HQPHQDHTLP  60
   61 SMGNAYMQRT FLALQSDPLK TRLDLIHKQA IDHLTLVNAY AAYARKLKLD ASKQLKLFED 120
  121 LAINFSDLQS KPGLKSAVSD NGNALEEDSF RQLEKEVKDK VKTARMMIVE SKESYDTQLK 180
  181 IQKLKDTIFA VQEQLTKAKK NGAVASLISA KSVPKSLHCL AMRLVGERIS NPEKYKDAPP 240
  241 DPAAEDPTLY HYAIFSDNVI AVSVVVRSVV MNAEEPWKHV FHVVTDRMNL AAMKVWFKMR 300
  301 PLDRGAHVEI KSVEDFKFLN SSYAPVLRQL ESAKLQKFYF ENQAENATKD SHNLKFKNPK 360
  361 YLSMLNHLRF YLPEMYPKLN KILFLDDDVV VQKDVTGLWK INLDGKVNGA VETCFGSFHR 420
  421 YGQYLNFSHP LIKENFNPSA CAWAFGMNIF DLNAWRREKC TDQYHYWQNL NEDRTLWKLG 480
  481 TLPPGLITFY SKTKSLDKSW HVLGLGYNPG VSMDEIRNAG VIHYNGNMKP WLDIAMNQYK 540
  541 SLWTKYVDNE MEFVQMCNFG L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle