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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FUT1_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQNSYRRRS SPIRTTTGGS KSVNFSELLQ MKYLSSGTMK LTRTFTTCLI VFSVLVAFSM  60
   61 IFHQHPSDSN RIMGFAEARV LDAGVFPNVT NINSDKLLGG LLASGFDEDS CLSRYQSVHY 120
  121 RKPSPYKPSS YLISKLRNYE KLHKRCGPGT ESYKKALKQL DQEHIDGDGE CKYVVWISFS 180
  181 GLGNRILSLA SVFLYALLTD RVLLVDRGKD MDDLFCEPFL GMSWLLPLDF PMTDQFDGLN 240
  241 QESSRCYGYM VKNQVIDTEG TLSHLYLHLV HDYGDHDKMF FCEGDQTFIG KVPWLIVKTD 300
  301 NYFVPSLWLI PGFDDELNKL FPQKATVFHH LGRYLFHPTN QVWGLVTRYY EAYLSHADEK 360
  361 IGIQVRVFDE DPGPFQHVMD QISSCTQKEK LLPEVDTLVE RSRHVNTPKH KAVLVTSLNA 420
  421 GYAENLKSMY WEYPTSTGEI IGVHQPSQEG YQQTEKKMHN GKALAEMYLL SLTDNLVTSA 480
  481 WSTFGYVAQG LGGLKPWILY RPENRTTPDP SCGRAMSMEP CFHSPPFYDC KAKTGIDTGT 540
  541 LVPHVRHCED ISWGLKLV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle