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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ERG12_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.25
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTHVCLWT LVAFVLTWTV FYLTNMKKKA TDLADTVAED QKDGAADVII VGAGVGGSAL  60
   61 AYALAKDGRR VHVIERDMRE PERMMGEFMQ PGGRLMLSKL GLQDCLEDID AQKATGLAVY 120
  121 KDGKEADAPF PVDNNNFSYE PSARSFHNGR FVQQLRRKAF SLSNVRLEEG TVKSLLEEKG 180
  181 VVKGVTYKNK EGEETTALAP LTVVCDGCYS NLRRSLNDDN NAEIMSYIVG YISKNCRLEE 240
  241 PEKLHLILSK PSFTMVYQIS STDVRCGFEV LPENFPSIAN GEMSTFMKNT IVPQVPPKLR 300
  301 KIFLKGIDEG AHIKVVPAKR MTSTLSKKKG VIVLGDAFNM RHPVVASGMM VLLSDILILR 360
  361 RLLQPLSNLG DANKVSEVIN SFYDIRKPMS ATVNTLGNAF SQVLIGSTDE AKEAMRQGVY 420
  421 DYLCSGGFRT SGMMALLGGM NPRPLSLVYH LCAITLSSIG QLLSPFPSPL RIWHSLKLFG 480
  481 LAMKMLVPNL KAEGVSQMLF PANAAAYHKS YMAATTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle