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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP49_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLTFLSLL LHFVVFIAST IPSSSFLLND RTFERSNLPS TRAEKLIREL NLFPQQDLNV  60
   61 IDVADLPLTA AEGPGIVERK FVFPNILADG GPTVDDLGHH AGYYKLPKSR GASMFYFFFE 120
  121 SRNKKDAPVV IWLTGGPGCS SELAVFYENG PFKITSNMSL AWNEYGWDQV SNLLYVDQPV 180
  181 GTGFSYTTDK SDIRHDETGV SNDLYDFLQA FFAEHPKLAK NDFYITGESY AGHYIPAFAS 240
  241 RVHKGNKANE GVHINLKGFA IGNGLTDPAL QYPAYPDYAL EMGLITQKEH DRLEKIVPLC 300
  301 ELSIKLCGTD GTTSCLASYL VCNSLFSGVM SHAGGVNYYD IRKKCVGSLC YDFSNMEKFL 360
  361 NLQSVRKSLG VGDIDFVSCS TSVYQAMLVD WMRNLEVGIP TLLEDGISLL VYAGEYDLIC 420
  421 NWLGNSRWVN AMEWSGKTNF GAAKEVPFIV DGKEAGLLKT YEQLSFLKVR DAGHMVPMDQ 480
  481 PKAALKMLKR WMENSLIEDA TVTVAAQGGE ELVAQM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle