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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: COBL2_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNILFSRFSF LLLFLCSWTS FTFTTTEAYD ALDPYGNITI KWDIMSWTGD GYVAVVTIFN  60
   61 FQQYRHIEAP GWQLGWSWMK KEVIWSMVGG QATEQGDCSK FKGNIPHCCK KTPAIVDLLP 120
  121 GTPYNQQISN CCRGGVISAW AQDPATAISS FQISVGQSGT TNTTVRAPRN ITLKAPGPGY 180
  181 TCGPAKLVKP SRFISADKRR KTQSLLTWNI TCTYSQFLAR KTPTCCVSLS AFYNETIVPC 240
  241 PTCSCGCQNS SQAGTCVDPK IASVVPALGK NNLEPLLQCT QHMCPIRVHW HVKTSYKEYW 300
  301 RVKVAITNFN YNMNYSQWNL VVQHPNFDNL TKLFSFNYKP LNPYLNINDT AMLWGIKFYN 360
  361 DFLSQAGPVG NVQSELLFQK NPLEFTFEKG WAFPRRIYFN GDNCVMPPPD SYPWLPNASP 420
  421 NIATSPFVIL LITFLSVLIL M

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle