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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CK5P1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSLSSLS SILSNPHGCS LCFKASTQRC FALRFLSSKA THASSSSSSA LLPRCRSSTH  60
   61 RLTQKPINRK KGFSLNLSRS FSISQIASSG KFDGPSLHQF VSNAQAHASL TTPETESEST 120
  121 LDSDIASKGR IYHETYGCQM NINDMEIVLA IMKNSGYKEV VTDPESAEVI FVNTCAIREN 180
  181 AEQRVWQRLN YFWFLKREWK VNAATGRAKS LKPPKVVVLG CMAERLKDKI LDSDKMVDVV 240
  241 CGPDAYRDLP RLLEEVDYGQ KGINTLLSLE ETYADISPVR ISENSITAFV SVMRGCNNMC 300
  301 AFCIVPFTRG RERSRPVESI IREVGELWES GVKEVTLLGQ NVNSYNDDSA DRESGANWEY 360
  361 SEGFSSRCKV KNMGLRFADL LDRLSVEFPE MRFRFTSPHP KDYPDELLYL MRDRHNICNL 420
  421 IHLPAQSGNS RILEQMRRGY TREAYLDLVK KIRSIIPDVA ITSDFITGFC GETEEEHQET 480
  481 LSLVRAVGYD MAYMFAYSMR EKTHAHRNYT DDVPEEVKQR RLTELIDAFR ETTGPCYDSQ 540
  541 VGSTQLVLVE GPNKRAPETE LIGKTDKGHR VSFVTKPLFD KACLLDGDDL KRNPGIGDFV 600
  601 EVQIEKSTRA SLFGEALAIS KMSLFHDVGV VDAVVASCAS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle