YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	APR3_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALAINVSSS SSSAISSSSF PSSDLKVTKI GSLRLLNRTN VSAASLSLSG KRSSVKALNV  60
   61 QSITKESIVA SEVTEKLDVV EVEDFEELAK RLENASPLEI MDKALEKFGN DIAIAFSGAE 120
  121 DVALIEYAHL TGRPYRVFSL DTGRLNPETY RLFDTVEKHY GIRIEYMFPD AVEVQALVRN 180
  181 KGLFSFYEDG HQECCRIRKV RPLRRALKGL RAWITGQRKD QSPGTRSEIP VVQVDPVFEG 240
  241 LDGGVGSLVK WNPVANVEGN DVWNFLRTMD VPVNTLHAAG YVSIGCEPCT RAVLPGQHER 300
  301 EGRWWWEDAK AKECGLHKGN IKENTNGNAT ANVNGTASVA DIFNSENVVN LSRQGIENLM 360
  361 KLENRKEAWI VVLYAPWCPF CQAMEASFDE LADKLGGSGV KVAKFRADGD QKDFAKKELQ 420
  421 LGSFPTILVF PKNSSRPIKY PSEKRDVDSL TSFLNLVR

Type	Start	End	Confidence
Signal Peptide	1	21	0.62
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	458	0.99