YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ALA2_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRFVYINDD EASKELCCDN RISNRKYTLW NFLPKNLWEQ FSRFMNQYFL LIACLQLWSL  60
   61 ITPVNPASTW GPLIFIFAVS ASKEAWDDYH RYLSDKKANE KEVWIVKQGI KKHIQAQDIQ 120
  121 VGNIVWLREN DEVPCDLVLL GTSDPQGVCY VETAALDGET DLKTRVIPSA CVGIDLELLH 180
  181 KMKGVIECPV PDKDIRRFDA NMRLFPPFID NDVCSLTIKN TLLQSCYLRN TEWACGVSVY 240
  241 TGNQTKLGMS RGIAEPKLTA MDAMIDKLTG AIFVFQIVVV LVLGIAGNVW KDTEARKQWY 300
  301 VQYPEEAPWY ELLVIPLRFE LLCSIMIPIS IKVSLDLVKG LYAKFIEWDV EMIDQETGTA 360
  361 SYAANTAISE DLGQVEYILT DKTGTLTDNK MIFRRCCIGG IFYGNENGDA LKDAQLLNAI 420
  421 TSGSTDVIRF LTVMAICNTV LPVQSKAGDI VYKAQSQDED ALVIAASKLH MVFVGKNANL 480
  481 LEIRFNGSVI RYEVLEILEF TSDRKRMSVV VKDCQNGKII LLSKGADEAI LPYARAGQQT 540
  541 RTIGDAVEHY SQLGLRTLCL AWRELEENEY LEWSVKFKEA SSLLVDREWR IAEVCQRLEH 600
  601 DLYILGVTAI EDRLQDGVPE TIETLRKAGI NFWMLTGDKQ NTAIQIALSC NFISPEPKGQ 660
  661 LLMIDGKTEE DVSRSLERVL LTMRITASEP KDVAFVIDGW ALEIALKHHR KDFVELAILS 720
  721 RTAICCRVTP SQKAQLVEIL KSCDYRTLAI GDGGNDVRMI QQADIGVGIS GREGLQAARA 780
  781 ADYSIGRFRF LKRLILVHGR YSYNRTAFLS QYSFYKSLLI CFIQIFFSFI SGVSGTSLFN 840
  841 SVSLMAYNVF YTSVPVLVSV IDKDLSEASV MQHPQILFYC QAGRLLNPST FAGWFGRSLF 900
  901 HAIIVFVITI HAYAYEKSEM EELGMVALSG CIWLQAFVVA QETNSFTVLQ HLSIWGNLVG 960
  961 FYAINFLFSA IPSSGMYTIM FRLCSQPSYW ITMFLIVGAG MGPIFALKYF RYTYRPSKIN1020
 1021 ILQQAERMGG PILTLGNIET QPRTIEKDLS PISITQPKNR SPVYEPLLSD SPNATRRSFG1080
 1081 PGTPFEFFQS QSRLSSSSGY TRNCKDN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle