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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACA13_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL  60
   61 FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL ESLGGPNGLV SALKSNTRLG 120
  121 INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG 180
  181 LKEGWYDGGS IFVAVFLVVA VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD 240
  241 IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG 300
  301 FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI 360
  361 RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI IVVAIPEGLP LAVTLTLAYS 420
  421 MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV 480
  481 VELFHQGVAM NTTGSVFKAK AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV 540
  541 EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF 600
  601 EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA 660
  661 GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE KFRNYTQEER LEKVERIKVM 720
  721 ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI 780
  781 LDDNFASVAT VLKWGRCVYN NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV 840
  841 NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG 900
  901 RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV 960
  961 VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV PVPERHFFSY LKWKKRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle