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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1673392, gi|7...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKREGESTV GVMKRYMQFV KPYKKQIFVT VLIGIVKFSI PLALPLLLKY VVDDIIQGGG  60
   61 TASDKTTSLF TIMAIMFALF LILRPPVEYY RQYFAQWTAS KVLYDIRAKL FDHIQKLSLR 120
  121 FYANTRTGEV ISRVINDVEQ TKDFVITGLM NIWLDMLTIL IVISIMLTLD VKLTLISIVL 180
  181 FPLYGISVKY FYGRLRKLTR ERSQALAQVQ GHLHERIQGM PVIRSFAIED HEQAQFNEKN 240
  241 GHFLDKAIRH TNWNAKTFAV VNTITDLAPL IVIACAGYFV INGPLTVGTM VAFVGYIDRM 300
  301 YNPVRRLINS STTLTQSIAS MDRVFEFIDE PYELTDKPNA IKADQIRGGV EFQNVSFQYE 360
  361 KDKENILHDV SLKVNRGETV ALVGMSGGGK STLVSLIPRF YDVTSGRLLI DGTDIRDYEA 420
  421 RSLRNQVGMV LQDTFLFSET IRENIAIGKP DATLEEIIEA AKAANAHEFI MSFPEGYETR 480
  481 VGERGVKLSG GQKQRISIAR VFLKNPPLLI LDEATSALDL ESEHYIQEAM DKLAKDRTTF 540
  541 VVAHRLSTIT HADKIVVMEN GTIIEIGTHD ELMDYESQYK HLFTIQNLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle