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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148277511
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AAATEEPEVI PDPAKQTDRV VKIAGISAGV LVFILLLLVV IVIVKKSKLA KKRKDAMGNT  60
   61 RQEMTHMVNA MDRSYADQST LHAEDPLSLT FMDQHNFSPR YENHSATAES SRLLDVPRYL 120
  121 CEGTESPYQT GQLHPAIRVA DLLQHINLMK TSDSYGFKEE YESFFEGQSA SWDVAKKDQN 180
  181 RAKNRYGNII AYDHSRVILQ PVEDDPSSDY INANYIDGYQ RPSHYIATQG PVHETVYDFW 240
  241 RMVWQEQSAC IVMVTNLVEV GRVKCYKYWP DDTEVYGDFK VTCVEMEPLA EYVVRTFTLE 300
  301 RRGYNEIREV KQFHFTGWPD HGVPYHATGL LSFIRRVKLS NPPSAGPIVV HCSAGAGRTG 360
  361 CYIVIDIMLD MAEREGVVDI YNCVKALRSR RINMVQTEEQ YIFIHDAILE ACLCGETAIP 420
  421 VCEFKAAYFD MIRIDSQTNS SHLKDEFQTL NSVTPRLQAE DCSIACLPRN HDKNRFMDML 480
  481 PPDRCLPFLI TIDGESSNYI NAALMDSYRQ PAAFIVTQYP LPNTVKDFWR LVYDYGCTSI 540
  541 VMLNEVDLSQ GCPQYWPEEG MLRYGPIQVE CMSCSMDCDV INRIFRICNL TRPQEGYLMV 600
  601 QQFQYLGWAS HREVPGSKRS FLKLILQVEK WQEECEEGEG RTIIHCLNGG GRSGMFCAIG 660
  661 IVVEMVKRQN VVDVFHAVKT LRNSKPNMVE APEQYRFCYD VALEYLESS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle