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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pab-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMNVAAPAA AVAGAAAPQP GQNQTGSSYT MASLYVGDLH PDVNESILFE KFSAAGPVLS  60
   61 IRVCRDNATR LSLGYAYVNF QQPADAERAM DTMNFEALHG KPMRIMWSQR DPAMRRSGAG 120
  121 NIFIKNLDKV FVGKFQPRAQ RNRELGETAK QFTNVYVKNF GDHYNKETLE KLFAKFGNIT 180
  181 SCEVMTVEGK SKGFGFVAFA NPEEAETAVQ ALHDSTIEGT DLKLHVCRAQ KKSERHAELK 240
  241 KKHEQHKAER MQKYQGVNLY VKNLDETVDD DGLKKQFESY GNITSAKVMT DENGRSKGFG 300
  301 FVCFEKPEEA TSAVTEMNSK MVCSKPLYVA IAQRKEDRRA QLASQYMQRL ASMRMHGNVP 360
  361 GAAMYNPTQP GPGYYVANPM QQQRNFAGGQ QMVRPGGRWG MQNQYPVQNQ YMMAQGPGVY 420
  421 QNRMGRPQNQ QGGPRGPPQQ YNQVAQGGVR MQGPPRTQNP GVQQQNVPRP PQQQQQQRPA 480
  481 PTGPKAPPQP YQAYQQRPQG IVIGGQEPLT SAMLAAAAPQ EQKQLLGERI YALIEKLYPG 540
  541 HKDAGKITGM MLEIDNSELI MMLQDSELFR SKVDEAASVL VSAQKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle