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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pab-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMNVAAPAA AVAGAAAPQP ADAERAMDTM NFEALHGKPM RIMWSQRDPA MRRSGAGNIF  60
   61 IKNLDKVIDN KSIYDTFSLF GNILSCKVAI DEDGFSKGYG FVHFETEEAA QNAIQKVNGM 120
  121 LLAGKKVFVG KFQPRAQRNR ELGETAKQFT NVYVKNFGDH YNKETLEKLF AKFGNITSCE 180
  181 VMTVEGKSKG FGFVAFANPE EAETAVQALH DSTIEGTDLK LHVCRAQKKS ERHAELKKKH 240
  241 EQHKAERMQK YQGVNLYVKN LDETVDDDGL KKQFESYGNI TSAKVMTDEN GRSKGFGFVC 300
  301 FEKPEEATSA VTEMNSKMVC SKPLYVAIAQ RKEDRRAQLA SQYMQRLASM RMHGNVPGAA 360
  361 MYNPTQPGPG YYVANPMQQQ RNFAGGQQMV RPGGRWGMQN QYPVQNQYMM AQGPGVYQNR 420
  421 MGRPQNQQGG PRGPPQQYNQ VAQGGVRMQG PPRTQNPGVQ QQNVPRPPQQ QQQQRPAPTG 480
  481 PKAPPQPYQA YQQRPQGIVI GGQEPLTSAM LAAAAPQEQK QLLGERIYAL IEKLYPGHKD 540
  541 AGKITGMMLE IDNSELIMML QDSELFRSKV DEAASVLVSA QKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle