YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE36053
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHEAIPFLPV PVAITCLLFN IFIPGSGTIL SGFFALCMGQ PRINLKEGRK LITLVVNLLV  60
   61 GISQFFTITF LFVGWFWSIA WGGLLIIHSM QYREALQQRR QEAVATAAIE ALTKDSILHR 120
  121 RDVKTLLCLR SGKNGPGRFA ELIDIFSLLE NQQMIQKYMY LLNYVPFLSA SVKYNIQLLH 180
  181 DIMEF

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.69
Transmembrane Helix	12	37	0.83
Cytoplasmic	38	50	0.65
Transmembrane Helix	51	71	0.72
Non-Cytoplasmic	72	72	0.38
Transmembrane Helix	73	92	0.75
Cytoplasmic	93	185	0.74