YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE36021
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISDYFYLLF TISLLANSAL MVVTHQSSNG NRISDAPKDQ MTESKEWTRD AIQKMWSERN  60
   61 LMGSTPIHVI DPPGLPSVRL VFKNESASLT GSLKHRYSWS LMMWALLEGH VKNGTHVFEA 120
  121 SSGNTACSLG YMCRLLGLQF TAVVPDTIEQ VKVRRIEEQE GFVVRVPISD RLIIAEQLAK 180
  181 STGGFFMNQF KNAFHAEEFH ESGSASSKPS ANLMHELFHQ LNSTPPSIFV HPAGTGGTLS 240
  241 SIGRYAKKYG LDTEIVLADT QYSIYYDYVL NGTFSKNTGA HHWVAPGMAG IGYGAMGPAQ 300
  301 IAETTSLDPA VIDRVLKIPD LASTAAMKVA RDVGINGGTS TGVNFLAALH IGALIRAQNP 360
  361 KNQEIFTIAT ILADSGKYYE TTYFNRKWIS EKFKTHGGLP VYDCWLQVIQ DCWISGKDPL 420
  421 DIGRKMC

Type	Start	End	Confidence
Signal Peptide	1	21	0.55
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	427	0.94