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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: glr-6
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNIFRFLLL SFLGTGVSSI RIGLITSHHL EHSVRTAVNI IVPRINEQIV KTRGACFITH  60
   61 TSFIALKNSH EDLNTKICDL ANSEVSVIIG VVDRESGSII EEQCAELNIL FIHYYWTPGY 120
  121 QKKQQTSLNL YPSMEYSQLM ERLINLWRWD NFVYIYSNYD APKQLIETLS RLEKSPALLR 180
  181 AHTLDDSMMA TALALRDTCD RNRCWPKKNR VLIELSPNET LTFFDASLKL GMISVHNWFL 240
  241 ITALDDLNDH LSQYTHNGMR VSLLTVSKEK WNQNDLAIKL PDMYQEYLAK IPSNPRTPFK 300
  301 DFAFIFDSIL LACQAGDRRI ISCGDNEAVK KFKLPIVKPF KGLTGKISFN GTSDRSDSEL 360
  361 HIWEMGITGA GLHTGIWKST WEGSKELTML AKNIPGTHEH YQASVRESRT LKVTSIHEKP 420
  421 YVIEKIMPDG RIKHEGFCVD LLDKLAEMLH FNYTLKIVKD NKYGERKNGT DEWDGMIGEI 480
  481 LRGDADMAVA PITVTATRLE VIDFTDPFLQ LGISMLMRQP NPKSSSSLTR FLWPLSASVW 540
  541 TFSAIATVIT ALLVTVAAVL SPKESTAEFK IQNSVWYLVC ILLRAGSGYN CQAGATRLIS 600
  601 AVWWSFTLVL IAQYTANFAA LLTVDRKSMP FNSFEELGNQ TEYNFGSILG GSTMQFFKYS 660
  661 RIETFRRLWE RMQSAEPSAF VGTNHEGVNR VLNEKYVFLM ESATLDYQVT QNCNLTRVGN 720
  721 VVLGSNGYSI ALPKGSKWRE KLTRQILDLN EKGIILMLKN NWWKKSQQEC QSSEPEDLQT 780
  781 ALGAENVYGL FLLLALGSGI GVLCAVLEHT HFIFFEKNKR NGQTPKLQQM IETIHAEIRN 840
  841 SPKF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle