YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE35691
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTESTKSGGG PNLRNLLYTI WTSTECVLYK VLFNRVTLIA FYAFWFLFGV LVLRKTQNAI  60
   61 TAVRYVKTHG ETVSLSSIEE SREFADLIDT LDRKFSRPPA IFLLNQYALN MTDNFLCNTA 120
  121 TLDGAHERFI FVTLDTVARD TIKKRWPEIQ QFHWPTPSLY KPFSFAEGPY QTIYLLRSNL 180
  181 ALALIKKGKS FWMMQQDTFW RKNIFDMNYE DDMSYDAIFD QLGSEEEHSM RKEWVNGANF 240
  241 FIRANNDTQL FFERMSEKLA HWYTPDMGIM IQQCHTWKKP VCAYIPHNVV YSWEWMFTEQ 300
  301 KDPPYLMQLD CETDGGSKLM QLGRYGFHFV NPDGTCNDQK VALAKGKMEN GTVEVQMSKT 360
  361 LPSWGRLQFK AYWYIVDYML WTPIIGEYLK PYLAMIGFIL MITI

Type	Start	End	Confidence
Cytoplasmic	1	30	0.66
Transmembrane Helix	31	52	0.73
Non-Cytoplasmic	53	404	0.81