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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: twk-35
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLSHGEHRQ SFKQKRAEEK RRWSSSGSHH QPQAKQSLAV LAQLMLPALI EEHTAQQEDV  60
   61 VVPTHYKADG SLSRTASNRR HVFQSVNLLQ RANGQMRKGA AGVWDIAGRA HLAGKRKVEQ 120
  121 LQQKPPLWLV ILNQAYHKYG LKHAVLIIVF LIYCISGGLV FWLIEEPYQS ELRDAWQHKI 180
  181 ENNRTARVDA MMKKIFNNSD YLIYIKGNTS QRLTTFFIEE LGSYENQLGV KWSQQKMDWD 240
  241 FWNAVLFAGT ICTTIGYGHI YPMTDAGRML TMIFALFGIP LMLLVLQDFG KLLTITMKFP 300
  301 WFQTKRLMRR IMRCCTKQPI EEMKEIERQE RHDLDIFDLP LPVGIALIVT WIFICSFVLS 360
  361 VWDHNWTLLE SFYFFFTSLS TVGLGDLVPS SPRLLITMFG FILVGLSLVS MVINLLQAKM 420
  421 KSTYEAGRND EKTPHIHQTL PTSLGVLQCF SPDEEKKTDY SERSLSRSTQ TSLSLPGVRQ 480
  481 VNNTASINLR LLLLQVVLRS DGVHWVNTDT SSPTKSPDEV TNLVEYETAL RVCEQIGDNN 540
  541 NEEFSEAESL ICETEVLLEV GECLSDLEEF LA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle