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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: catp-7
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPGGSRRPR NSQHATASTP SASSCKEQQK DVEHEFDIIA YKTTFWRTFF FYALSFGTCG  60
   61 IFRLFLHWFP KRLIQFRGKR CSVENADLVL VVDNHNRYDI CNVYYRNKSG TDHTVVANTD 120
  121 GNLAELDELR WFKYRKLQYT WIDGEWSTPS RAYSHVTPEN LASSAPTTGL KADDVALRRT 180
  181 YFGPNVMPVK LSPFYELVYK EVLSPFYIFQ AISVTVWYID DYVWYAALII VMSLYSVIMT 240
  241 LRQTRSQQRR LQSMVVEHDE VQVIRENGRV LTLDSSEIVP GDVLVIPPQG CMMYCDAVLL 300
  301 NGTCIVNESM LTGESIPITK SAISDDGHEK IFSIDKHGKN IIFNGTKVLQ TKYYKGQNVK 360
  361 ALVIRTAYST TKGQLIRAIM YPKPADFKFF RELMKFIGVL AIVAFFGFMY TSFILFYRGS 420
  421 SIGKIIIRAL DLVTIVVPPA LPAVMGIGIF YAQRRLRQKS IYCISPTTIN TCGAIDVVCF 480
  481 DKTGTLTEDG LDFYALRVVN DAKIGDNIVQ IAANDSCQNV VRAIATCHTL SKINNELHGD 540
  541 PLDVIMFEQT GYSLEEDDSE SHESIESIQP ILIRPPKDSS LPDCQIVKQF TFSSGLQRQS 600
  601 VIVTEEDSMK AYCKGSPEMI MSLCRPETVP ENFHDIVEEY SQHGYRLIAV AEKELVVGSE 660
  661 VQKTPRQSIE CDLTLIGLVA LENRLKPVTT EVIQKLNEAN IRSVMVTGDN LLTALSVARE 720
  721 CGIIVPNKSA YLIEHENGVV DRRGRTVLTI REKEDHHTER QPKIVDLTKM TNKDCQFAIS 780
  781 GSTFSVVTHE YPDLLDQLVL VCNVFARMAP EQKQLLVEHL QDVGQTVAMC GDGANDCAAL 840
  841 KAAHAGISLS EAEASIAAPF TSKVADIRCV ITLISEGRAA LVTSYSAFLC MAGYSLTQFI 900
  901 SILLLYWIAT SYSQMQFLFI DIAIVTNLAF LSSKTRAHKE LASTPPPTSI LSTASMVSLF 960
  961 GQLAIGGMAQ VAVFCLITMQ SWFIPFMPTH HDNDEDRKSL QGTAIFYVSL FHYIVLYFVF1020
 1021 AAGPPYRASI ASNKAFLISM IGVTVTCIAI VVFYVTPIQY FLGCLQMPQE FRFIILAVAT1080
 1081 VTAVISIIYD RCVDWISERL REKIRQRRKG A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle