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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE33704
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.67
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLFAIALL GAVFAEDAWK AANVDRTIDA TSQIVKVSTL YSFENVGNGP QSKVLIALSK  60
   61 EESATLSFIS AGIDGSKGKL KISEKPAEKD LAVYEVDLRT PVAKGAKVTI RINLRITQVL 120
  121 EPLPSKIQQS DSQFVVLHTS AYVPSLYETV TQKTTIRTTQ GGKLLSATTV SPSKQETERV 180
  181 IYGPYVNIPA FETKPVKVHY ENNSPFVIAT IVERFIEVSH WGNIAVEEYI ELVHKGAELD 240
  241 GPFSRIDYQM DRRGRRQPAL QQFTTVLPAQ AKDIYYRDEI GNISTSAVRI RADSVDVEIR 300
  301 PRFPLFGGWK TSYVIGYNLP SEEYLYSKGN QYALKTKLFD HVFNDIVVEK LRTKVLLPEH 360
  361 VKRVKVATPY AVDRRPEELK PTYLDTTGRL VLVLEKENIV PDHSQFFTVT YEFEFVDMLR 420
  421 EPLLASAFFF SLFFVIIVYS RFDFTISSDP AKDAEERSQI ILGNLAKSVD SKQSAYEDLI 480
  481 EASQQYKSTK NDADLQEAKK TFIAARNQEN STLTDKIATL KTDSGASAAE KASELLKYDK 540
  541 TVFDAVDNYL KAVEKSTTKT AGTEEQQFLN KVKDARNRAD SVLASI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle