YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE33577
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRRRVPAP PPQAPSVPAS IPRASGVTLS VHPIWPDIQF TQGELFFECT LFLYSVLALF  60
   61 LQYLNIYKTL WWLPKSYWHY SLKFHLINPY FLSCVGLLLG WRVTVCFWKT ITEVIATISA 120
  121 NQSQFIQSSL MIVEYAAIKT PVMTLIITSF LFSFNRVCHD FPSRSVLWFL FPILFYAFIF 180
  181 RSEIIGWLGR FREQIGKWRR REIEFSDVCE RLSESPPAQI DLESVLHMCS DSPAQIREEI 240
  241 QVLIDDLVLR VKKSIFAGVS TAFLSIMLPC IFVPFKTSQG IPQKILINEV WECQLAIVVG 300
  301 LTAFSLYVAY LSPLNYLDLL HRAAIHLGSW HQIEGPRIGH TGSMSSAPTP WSEFCLYNDG 360
  361 ETVQMPDGRC YRAKSSNSIR TVAAHPESSR HNTFFCSENR TI

Type	Start	End	Confidence
Cytoplasmic	1	44	0.76
Transmembrane Helix	45	66	0.86
Non-Cytoplasmic	67	85	0.67
Transmembrane Helix	86	105	0.88
Cytoplasmic	106	134	0.67
Transmembrane Helix	135	154	0.83
Non-Cytoplasmic	155	166	0.72
Transmembrane Helix	167	191	0.83
Cytoplasmic	192	254	0.87
Transmembrane Helix	255	275	0.91
Non-Cytoplasmic	276	292	0.79
Transmembrane Helix	293	314	0.79
Cytoplasmic	315	402	0.77