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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: glr-2
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.63
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKNLLVFGF LIFVKIGETS KKFPLRAFVA STDIDNDTAH AIIEMLRLAE MTFNALSDVD  60
   61 FDVLLGTRDL PPMEMATMMW NLNRIICDEM KLGYMLMLAG TNFKNYGIYE DIANHMKMPL 120
  121 IDWEPSKSEN IGKTTENNPM IFSVAPSAEQ LLIDYIQYKG WRDVVYIHDG KNADRTLRTM 180
  181 FSYLHEKSPK YQLFVDNYVA PSDEEMFKEF LNEFHRRIST QHTLKSNDSS EEIDEPIPVN 240
  241 VIVDLEGSYR TRAFLRALEE SVLVKKEYHY VFSNFDVDET DLSGFHFSLI NITIFRIFDK 300
  301 NNKKFLKTRA EFHDVYRGGF SNTDSIPTAA AFAHDAILVA GKALQIAMNE HGKGIFDKSF 360
  361 VRHQLFNRGR KGLYCRPHED QTESRQFETF EHGKKIAEAI KKVVLTDKDG TLTGRIQFDK 420
  421 VTGKRTNFSA EIVEIKPGVN SLNSIWERFQ WAEGEGFLLG GERYVQEKKK DSSQTRKGIL 480
  481 PSKPWQLRFN VVTVLVKPFV MLKRRNPGEP ELKGNDRFEG YCIDLLNLLA KNITGFEYDV 540
  541 FISDGNKYGS RQADGSWDGM IGYLLNETAD VAVAPLTITQ ERERAVDFSK PFMTTGISIM 600
  601 IKKPEKQEFN IFSFMEPLGM TIWIFTLSSY FGVSLTIFLV SWFSPYEKRI EFKRGEFTVT 660
  661 NEFTLYNSLW FTLAAFMQQG TDILPRAVSG RIASSCWWFF TLIIVSSYTA NLAAFLTLER 720
  721 MTPPIESVED LANQNKILYG VNEGGSTAAF FEDSIVPLYK KMWNFMVSTT QKQIELEKQS 780
  781 ITNSTSNRIF VSSYADGIEK VRTSKGKYAF LLEETTNNYE SGRRPCDTMK VGQNLNTLGY 840
  841 GIATKIGNPL RVSLNLAILY LSEKGELKKL ENKWWYDRGQ CDTGTSDGGT SSSLNLSKVA 900
  901 GIFYILLAGM VLSMCTALVE FLFRKNKENR EKERNRMRSS RPLKPGILAS CERAKQKQLQ 960
  961 NRRTKSEEVS TPRSTLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle