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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: haf-9
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSLYTGGQ ALFICLAFIG LDLLVNVFGL AWNGKYFTFD NIAHWFDLAN YSFLKNPVDF  60
   61 LAVALIRDSI LLGGAVSAWA SPSGFSQVAE NVKNVVFAMM LLIVAFAPSK LLAFYEDDNI 120
  121 RLAVGDWILM IWCIFASLLL QGIWTSVLAH VTEVAAGTGD SLLFGDAEHE ERLRQEEAEK 180
  181 AAEQRETFQL LFRLLGYMGR QWKYYGMAFF FLFCYSLSRV FIPYYTGEVV TAVFGDKASY 240
  241 EKLHKTVFIM GMLSLASTVF GGLRGGSFTY AHATIDRQIR NDLFRSVVKQ EIGFFDMNKT 300
  301 GEICSRLSAD CQTMSNTLSL YMNVLTRNLT MLFGSLIFMF TLSWKLSMIT LINIPIIFLV 360
  361 NKIFGVWYDM LSEETQNSVA KANDVAEEVL SSIRTVKSFA CENYESSRFM TFLNVTLKIA 420
  421 TRKVFVVIGL IWSNELLQMG ILTIVLWYGG HLVIENKVES GLLVSFLLYQ FQLGENLREL 480
  481 GEVWNGLMQA VGASRKVFEF IDRPPRVENT GTYAPDGMTG KIEFRHVAFS YPIRPDLPIM 540
  541 EDLTFTVEPG EVVALVGPSG GGKSSCIAML EHFYEPTSGE VLIDGVPVRE YDHKFLHTKV 600
  601 ALVGQEPVLY ARSVTENIGY GLDKYDDDMV QNSAKLANAH TFIMNDTTDG YNTNVGEKGS 660
  661 QMSGVYSNSL KFKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle