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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: catp-6
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLESGDHTL TLFAYRTGPF RTILFYALTV LTLGIFRLIL HWKQKWDVKM RMVPCTFEAA  60
   61 EYIYIIDNHN VSELQPVLRK SNATIPTENG EMRKVPELRW FVYRKLEYVW IDDLNSDESV 120
  121 DEISDNDNCW KTSFEIANRI PCRSLLAVSE SNFGLTLSEI SRRLEFYGRN EIVVQLRPIL 180
  181 YLLVMEVITP FYVFQIFSVT VWYNDEYAYY ASLIVILSLG SIVMDVYQIR TQEIRLRSMV 240
  241 HSTESVEVIR EGTEMTIGSD QLVPGDILLI PPHGCLMQCD SVLMNGTVIV NESVLTGESV 300
  301 PITKVALTDE TNDSVFNIEK NSKNVLFCGT QVLQTRFYRG KKVKAIVLRT AYSTLKGQLV 360
  361 RSIMYPKPVD FRFTKDLFKF ILFLACISGC GFIYTIIVMI MRGNTLRRII VRSLDIITIT 420
  421 VPPALPAAMS VGIINAQLRL KKKEIFCISP STINTCGAIN VVCFDKTGTL TEDGLDFHVV 480
  481 RPVMSAVNQE IQKVKLEKSN RTEFMGEMTE LTSRNGLPFD GDLVKAIATC HSLTRINGVL 540
  541 HGDPLDLILF QKTGWTMEEG IEGDIEEETQ RFDNVQPSII KPTDDKSAEY SVIRQFTFSS 600
  601 SLQRMSVIVF DPREDRPDNM MLYSKGSPEM ILSLCDPNTV PEDYLLQVNS YAQHGFRLIA 660
  661 VARRPLDLNF NKASKVKRDA VECDLEMLGL IVMENRVKPV TLGVINQLNR ANIRTVMVTG 720
  721 DNLLTGLSVA RECGIIRPSK RAFLVEHVPG ELDEYGRTKI FVKQSVSSSD EVIEDDASVS 780
  781 ISMCSSTWKG SSEGDGFSPT NTEVETPNPV TADSLGHLIA SSYHLAISGP TFAVIVHEYP 840
  841 ELVDQLCSVC DVFARMAPDQ KQSLVEQLQQ IDYTVAMCGD GANDCAALKA AHAGISLSDA 900
  901 EASIAAPFTS KVPDIRCVPT VISEGRAALV TSFGIFKYMA GYSLTQFVTV MHLYWISNIL 960
  961 TDGQFMYIDM FLITMFALLF GNTPAFYRLA HTPPPTRLLS IASMTSVVGQ LIIIGVVQFI1020
 1021 VFFSTSQQPW FTPYQPPVDD EVEDKRSMQG TALFCVSMFQ YIILALVYSK GPPFRGNLWS1080
 1081 NKPMCALTIF ATLLCLFIVI WPTELVLKTL GNVELPSLTF RIFIVIVGAV NAAVSYGFET1140
 1141 LFVDFFLLGY WERYKKKRSI EAIIDYVPTT NSDHIRRPSI NGVTSSRTES TLLSAEGQQL1200
 1201 HMTTSKNGKG GENPHSSALF ERLISRIGGE PTWLTNPIPP HSLSEPEEPE KLERTY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle