YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE32832
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	7	0.86
Transmembrane Helix	8	27	0.72
Non-Cytoplasmic	28	111	0.82
Transmembrane Helix	112	130	0.86
Cytoplasmic	131	137	0.84
Transmembrane Helix	138	159	0.86
Non-Cytoplasmic	160	163	0.62
Transmembrane Helix	164	185	0.89
Cytoplasmic	186	197	0.84
Transmembrane Helix	198	217	0.84
Non-Cytoplasmic	218	223	0.69
Transmembrane Helix	224	242	0.93
Cytoplasmic	243	305	0.97
Transmembrane Helix	306	325	0.93
Non-Cytoplasmic	326	333	0.83
Transmembrane Helix	334	355	0.88
Cytoplasmic	356	365	0.80
Transmembrane Helix	366	388	0.94
Non-Cytoplasmic	389	395	0.84
Transmembrane Helix	396	417	0.88
Cytoplasmic	418	428	0.82
Transmembrane Helix	429	451	0.69
Non-Cytoplasmic	452	457	0.71
Transmembrane Helix	458	478	0.84
Cytoplasmic	479	520	0.90

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHIIPPGIYR VDVLILISYQ MCHFFSIQQL FPIFLNYTPK TNCIQTAQGK VCYDVPKSKC  60
   61 LEYNENFPNL CANLTGTALS DCHTEKSHSY YSSAAMEFEI YCRPGWKDFR PAFVQYVGVL 120
  121 IGNIILGYVA DQIGRKKTFI LSMLIGIPSL SLSATFNSIA AFYIFRALTG IGIAGTMIVG 180
  181 WAYFSELVSP HQRFKLRTFS NWANARIMLT LVALFTGEWR LSSHVSAVIS LITLAIVYFI 240
  241 LPESHIWLRK KGRYEEAEVS RKRIADLAGI EFVPMPPPEK AADNVEPEKA VNICTVFADP 300
  301 QLRKNILILW LMWFVTGMTA YLTDLCGGDM TKNFWVGQFL SGILLSVVRI IMGFADGYLP 360
  361 WMGRRFVLLC SQSLAIVFFG CVIAFLFAGE KGQWYYTAVY LASFVFTSIV WEPCYLCASE 420
  421 LMPTDVRATS TASCSIVGRF ANIGASMLSG LKTVYEPGVH MISISLGLTN VVAAYFFLQE 480
  481 TKNCSLDKAG TSAAKPAEKA NEQEMKDLIN KGEEEDVEKK