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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE32787
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLTGIFFNV NGKDVNEENV DPELTLAYYL RNKLGLRGTK LGCEEGVCGS CTVVLGTWDD  60
   61 CQNKAVYRAV NACLVPLFHV HKTFVITVEG VGSRDKIHPI QDRMARGHAL QCGFCSPGFV 120
  121 MSAYALFSNQ PNPTIQQINA AIRANLCRCT GYRPILEALY SFSSESGGCC GGNKTGGGCC 180
  181 KDKSSSDEDG GYDEKLLSFN DFPKYDPTQE IIFPPSLRVF SDSETPVTLK GDRIELLLPK 240
  241 NIDQFKKFKK DRTVISSGLI TRFVSTRNPK EFSQKWISTK YVKEFNEITV NKDSVVVGAA 300
  301 LNIQKMADTL TSSLSINIGK EIDSFIQKFS SPQIANFATW TGAIISGAKS SLSVSDLLIL 360
  361 FNVLDAKLTL LNNSGELTQV AIEEFAEKKL FATHTIVNAI FSRSLTGFLF CLKLGETSEQ 420
  421 DSTNFNFAAL VGNQVSRIFV GLGGQPKRLT SLEVHIDALK GLSVSDLCQT TEMSDYKNVK 480
  481 IALTRFSDFM NHKEKTEEIE GINYLQYFKP KTNESAGRPI ANYFNERAIT GEAFYVNDIQ 540
  541 AYNAVHLGFV LSTVPHAEIT KIDVSEALQL EGVAGYFGVS DVPGNNTPGL QISNMNFPDD 600
  601 TTIFADKKEA IEAKSLLGDV QHFGKDENLV KESLENSSKV LEGECDIGGQ EHYYLETQSS 660
  661 LVIPGEGDEL IVNCSTQGTS FTQLMVAETM KIPAHKIIVK TKRLGGGFGG KVNNASWIAC 720
  721 MCAIVAKKLN RPTYGFLSRA DDLAITGKRH EVHAKYRVGI NFDGKIEGIH YQAWLNGGWS 780
  781 KDHSEGVTMV MGLMVDDVYN MGTIRFDGYP VKTNSNSNTA LRGYGNPQSK LINEGVMRRI 840
  841 ARDVGKSTEE IKRINFALEG GRRYLGGKIH NDALVECWEY CKKWSEFENR QSGIKQFNKN 900
  901 STAVKRGIAM SSVRFGLPHP GPTGHGIASL LINLDGSVQL SIGGTEMGQG LNQKMLQVCS 960
  961 EALKRPIDTI TIVDCSTDKV TNAPETGGSQ NADTNGLAVL ACCKKIMSRL QPIIDKNDGE1020
 1021 WEKSIREAYG AYVPLQCTEY GTVERAKFGV GEMESPYNTT GACAVEMEID TLTGYNRVIR1080
 1081 VDIVMDVGES LNPALDIGQI EGAFIQGYGL VTCEKITFNK TTGQLDQNTA GKYKIPKASD1140
 1141 VPKDFRVKLL GINNANGAQV YSSKGIGEPP LMMSCGAVHS SIMNCIDNWR NENGIHEFVD1200
 1201 TISPLSAEKI QELCSKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle