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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE32710
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPPKLLGVV LTTALLFHIA LTAKQAVVSR KSKLCGNVEC EEVLFKARVK RVMGINNDPS  60
   61 FLNLAENAII SVVAVKFSDR PDIMEGKLNG EGSNGFFYAG AIDIMPFAEF LRTAITDKKE 120
  121 MLMISQNPAD IGDKRIVGFL HSETDLVRDF NAKNAQAAAE NGLPAPEPIP IPEPAHTGHG 180
  181 HSHGGHGHSH GGHGHSHGHP APTPAPTPAP KPIEEAPKPA EEPVKPADLE MDAEIERLIK 240
  241 EEEERMKNVA EQPPLVLQSL PETPEAQKLP EEPLEPVTPE PIPEAPVPIA QYIQEPTTTP 300
  301 APLEAPAPVE NAPNLPTPTF SVDDLMAQAA RDALNSNSIV PDAPKVEEPE PAPTPAPAPA 360
  361 EDPVVTPAPE ELTGVCYKDD CQGLQTPPPP APPPPAPAVP EEAQAPTPAP EEAPEAQIPA 420
  421 ETAQIPPENA VPEAPEEPAP TTTPPPISAG EAEFLKWEEA RQKREAVAAA PYEDAQAHQF 480
  481 VASPPPHVSS GLIELIRSSL GLGNITDSSV LLVVNLTFVA ASFLVYIIIR SLSSGGESDI 540
  541 LDRQAHFDLM NKHKQLQLQL NAKITEIQNL QANGAAAQRP EQPNYEPELL ALRQQLAHLQ 600
  601 SELQTAHAQR QEFEIHYHQI RELAEQKDHQ IAQLTEQAND YQERLEKSQS ELQELARHVD 660
  661 SARAELMDSQ TSDYGRQQEL MEKQAELEQI YVKIDNLTAE NRDLTDKIAQ LQVSDSLELE 720
  721 ELEELRNKNL ELQEQVKQLK EELEKEKSVA GSGNSGGWSD IDDNEVVEAV QPIETTPISS 780
  781 ENSENLKKFE AEIAELKASL EKTEKELTKY RNLYNEKLTA ISDKENRSQI EMEHKLKNAE 840
  841 SDLQEAKRRA EEIGAEKKEL SDRLNEMLKN LNQSMQKSAE NDKMLTQLRE EAFAKEKQLL 900
  901 EHDSVLRKKD DKIRELDAEF KRVKMEYVKL ETKSFHDVRK LNMDVEELKT QLSMAGGVTS 960
  961 SRSIPDRLVS PLQEPIWDEP EPALQRVVLP LDGYSSMRRR STRRSQLPFG AESPSDQEKK1020
 1021 QAAPSHRRRS RSHGRQPPSF HDPYSMNPYL PGSSDSSFMS TSQPQFLPLN RQHSRSGHLM1080
 1081 SNSANGPYSS GGSNGGRSPP PEMPLLSAIP PPGARKPLGK RPDSAHHLGK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle