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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kcnl-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASPMLQHM YSLDESSLMG VSHHSPYRQQ RKRRAGISGA ATGGSHQRDG PFACAGGNGY  60
   61 SSAGFSNGRG FPPLGGRSPQ SSFDSNQDVA QISMNWMRMN GLGPSLRPFL NSGNHTPKKT 120
  121 VIHNSQSTNH ISRIGSLRRM HAADASIDGK LSLSGTQGDV AAACGETASR KSVSIAYSND 180
  181 LEAGGKGNGA IGDDSTVPLM DEKDDNSGGR LIRREILHEK RRHVSDRALA FAIMGIILMI 240
  241 IENELRTAYV IRPGSSLSHL LKFFIIFTTT ALLSFVGYFH VIEIQLFMNA NAADDWMVAL 300
  301 SFRRTCQIGL ELLICMLCPL PIEFIAPFMN DRFHDKTLYA VNVFLSIMMF FRLYWLCRVM 360
  361 LLHSRVFTDA SSRSIAGLNR VNFNARFILK TLMTICPGTM LMIFTAFLWI IAGWILRLCE 420
  421 REYMTPDKYN DINYVNSIWL VAITFLSVGY GDIVPKTNCG RSMAIVTGIL GTCASSMVVA 480
  481 VIARKLELTR AEKHVHNFMQ DTQLTKQLKH SAANVLRETW FIFKFRKLVE KPDFGKIRKH 540
  541 QRKFLLAIYE MRRVRRDQRK LAENLVSLGD VAKTSSNTYE LVHDVHSTQE GLSLRITAIE 600
  601 HQLSDISREL SSLAELLRGS VIITSDQMSN ERKVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle