YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE32326
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRLTSRSL GTSAACSRTA GIFRDEREVA FPIAGKSPKV VSLAEATRDI KSGDNVFVHG  60
   61 IAATPTPLLQ SLSEHAVANN LNKIKLHHLH LEGATPWTAE GVRDRIRSNS LFTGHNLRAC 120
  121 VNNGIADFNS CFLYEVPLLF RKGAIKLNAS LIQVSPPDAF GFCSLGTSVD TARAAVTNSP 180
  181 LIIAMVNKNM PRTFGDGVIH VSHIDYLVNE ADGFELHQRN IGPQNDQEKK IGKIIAENLV 240
  241 DNGATLQMGI GAVPDAALSA LSNHKDLGIH TEMFSDGVLD LIEKNAITNA KKAIHPGKLV 300
  301 VSFVYGSTKL YDYLNDNPLI EFGDVNWVND PAVVRKNPKV TAINSAVEID LTGQVVSDSV 360
  361 GKRFLSGFGG QVDFIRGAAI GNDGLGKPII ALPSISKKGQ SKIVPTINEG AGVVTSRAHV 420
  421 HYVVTEYGIA QLWGKNMRQR AYELIKISHP SQRESLDKAA FDRLKVMPSA D

Type	Start	End	Confidence
Signal Peptide	1	21	0.83
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	471	0.99