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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: obr-3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLERRKERKL TITSPNEDMR IVEPPAHKQR RASLSVAYHR LLSFSSSPIK KQKKEYRDEK  60
   61 KRVNDELLSA LRDPTVVVMA DTLKIRGALK RWNRYYCVLK PGLLILYKHK KADRGDWVGT 120
  121 VLLNHCELIE RPSKKDGFCF KLFHPMDMSI WGNRGPLGQS FGSFTLNPLN TSFLICRAPS 180
  181 DQAGRCWMDA LELSFKCTGL LKKTMNELDD KNGDSSMNDG QRDESRMSRD SDGDDTRELA 240
  241 VSETDAEKHF QEIDDVQDED HEDGKMSETS DTIREAFTES AWIPSPKEVF GPDGSLTEEV 300
  301 GEENKSLIWT LLKQIRPGMD LSKVVLPTFI LEPRSFLEKL ADYYYHADLI SEAVAEPDPF 360
  361 QRIVKVTKFF LSGFYKKPKG LKKPYNPILG ETFRCKWEHP DGSTTFYMAE QVSHHPPVSS 420
  421 LFITNRKAGF NISGTILAKS KYYGNSLSAI LAGKLRLTLL NLGETYIVNL PYANCKGIMI 480
  481 GTMTMELGGE VNIECEKTGY RTTLDFKLKP MLGGAYNQIE GSIKYGSDRL ASIEGAWDGV 540
  541 IRIKGPDGKK ELWNPTPEVI KTRLPRYEIN MDEQGEWESA KLWRHVTEAI SNEDQYKATE 600
  601 EKTALENDQR ARAKSGIPHE TKFFKKQHGD DYVYIHADYR PWDNNNDIQQ IENNYVVKTI 660
  661 SRHSKRKTGN SEQLGSDNTS EASESDEEVI EPKIKKKEIV PAKSKPITPE VADERIKEME 720
  721 RKFELAIRRM EAANERQSSR TLNAIQSTLL FVFVVTSVVQ SIFMFFMLRK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle