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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: obr-3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEFDENSRK SLKKQKKEYR DEKKRVNDEL LSALRDPTVV VMADTLKIRG ALKRWNRYYC  60
   61 VLKPGLLILY KHKKADRGDW VGTVLLNHCE LIERPSKKDG FCFKLFHPMD MSIWGNRGPL 120
  121 GQSFGSFTLN PLNTSFLICR APSDQAGRCW MDALELSFKC TGLLKKTMNE LDDKNGDSSM 180
  181 NDGQRDESRM SRDSDGDDTR ELAVSETDAE KHFQEIDDVQ DEDHEDGKMS ETSDTIREAF 240
  241 TESAWIPSPK EVFGPDGSLT EEVGEENKSL IWTLLKQIRP GMDLSKVVLP TFILEPRSFL 300
  301 EKLADYYYHA DLISEAVAEP DPFQRIVKVT KFFLSGFYKK PKGLKKPYNP ILGETFRCKW 360
  361 EHPDGSTTFY MAEQVSHHPP VSSLFITNRK AGFNISGTIL AKSKYYGNSL SAILAGKLRL 420
  421 TLLNLGETYI VNLPYANCKG IMIGTMTMEL GGEVNIECEK TGYRTTLDFK LKPMLGGAYN 480
  481 QIEGSIKYGS DRLASIEGAW DGVIRIKGPD GKKELWNPTP EVIKTRLPRY EINMDEQGEW 540
  541 ESAKLWRHVT EAISNEDQYK ATEEKTALEN DQRARAKSGI PHETKFFKKQ HGDDYVYIHA 600
  601 DYRPWDNNND IQQIENNYVV KTISRHSKRK TGNSEQLGSD NTSEASESDE EVIEPKIKKK 660
  661 EIVPAKSKPI TPEVADERIK EMERKFELAI RRMEAANERQ SSRTLNAIQS TLLFVFVVTS 720
  721 VVQSIFMFFM LRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle