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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: apx-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNFSSLLTT IFLCIISSAT GSGTIELLIS SPQTVLVEPT VCANFECAAP DDLSLARKVQ  60
   61 RRVPLRFGTG QYHGEARERI DLHLKIIEPT SNEILALQHH RPAADTEWNS DAPIVIETSR 120
  121 GFNVTVQLRN LCSSNYHGKR CNRYCIANAK LHWECSTHGV RRCSAGWSGE DCSNPICAGG 180
  181 CSNRGRCVAP NQCSCADGFN GTRCEQCLPR AGCVNGDCVN ETPNTCKCRD GFIGDRCDID 240
  241 IKICSLEKPC ANGGICSIDS SSSTGYKCHC PFEFVGSQCK TPLSKVRCSA EHVCKNGGAC 300
  301 ISMDDTNIQC KCRRGFSGKF CEIGNHGDCS AMRCSAGETC QISGDFAICV ENDELLLTTN 360
  361 KPAETTKSVE KWREPRKTAN DEQASDELQL RLIAAICVLF SVCVIGLALV SFFFYMHSFS 420
  421 KWKHPSSQQA GGSTILPTTT SIPMSTTSSG TGSPVYKVCI IDSEHRGNAP GSSSDSEPDH 480
  481 HCPPPHRHSP PPAYSSLVLY KKVPMAADDE SSFRV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle