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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE31552
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.79
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPLMLLLLC IAYSIFFMLI GANDAHNEVF YADKNSTLSF GGYDFYCIGI RLQDIPIKLN  60
   61 KTLSGELYLN LKVRSLLRLM FNKACDRNIA CEIYKNDISS RLTTESDDTH TSVDLTHSKI 120
  121 RCTRNSIEIM KFHMFVGRDD NMFFKNTIVS KLNGTGVYLQ CSGSYHTENV KLLENQKSLD 180
  181 IPYNPFKGFY IDISRNPINR FYQCEHNDEL ISFKLQNMAN NGYENKFKML MNSYTFQSEI 240
  241 QCVFDDQAIK NTHVSVILAC PSKSKCPELT NRANRRSHKI YTAFVPKSSN IDPKSYHCVL 300
  301 IINGNTVAEA FLEEADFSTT YYALLIIGAG LILTIFVILT KSLRQNNYNK VSTTDVRETR 360
  361 IEELNNKSKL GVGNSSTIYT AEICKTKKCI VIKESVRKSH CTKELKLLKS LKHPNIITPL 420
  421 GVIVQPEQKT CFNVQIRQHL LLPYYQKTCL ETYIHKFYPP KRGGNNIFHT NEATVPEEEI 480
  481 TMFDLVSIAW QVASALEYLK GMEITHRDVA MRNVLISNNK VCKITDFERA KKGETTRKIS 540
  541 IEKKIKEILK AHMSKDIPKE YPNECLKGVY YYYSSEVYCF GRLMLCLFSF MKPCDYGRIY 600
  601 PPIQPENCPK AIYDLIVDCI NENRKSRPSI SSCKDVLSTV LKHMDHDEFL KLKQTLIDEV 660
  661 NRNIVEEHFV SQYTQTSHLF L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle