YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE31180
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFHFLIAIN FVLHFSSATD YIISKQDIKQ LDEWDLKVLR DFVRGRGRPI VERIPLDLED  60
   61 GPDFKEPDQD FELIDFSSPM ISQGGMFAAP SNKKAEMFPI PLTPPQPITQ IITPASKRKP 120
  121 KPPPKPPQLV EDKPSVEDYE QLASMIQMFI DRRSHKKNGD QALQNNAKSK KKSGEVLGNN 180
  181 APKSQEVYET RMKELSTELT KILKQLEGTK LEKQPEVHVL RNGSAEQTID GQYTFIASIT 240
  241 LVKDGDKSIL VDTGLGTNIN ARTELIKSLE MHGLSPADVD IVVSTHGHPD HVGGVHDFPD 300
  301 ALHYHGWYSH QRTKFNLTAL FENDTMNLSE NVMLVKCRGH TSDDIGVVVR GVKRRGDVLV 360
  361 SGDLFMREED IDHPMMWQPL SADVIAQRDS RRRYGCIVDW IVPGHGSMFQ VTTNVKKALK 420
  421 C

Type	Start	End	Confidence
Signal Peptide	1	18	0.84
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	421	0.99