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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: nas-39
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSANIAII VNIIFLFIVV EFVLPTFIRS GDVRFRRYYR NNGRVSRAAT AKKERIWPEG  60
   61 IIPFVIASNF SGEHQHLFLR AMRHWENFTC VSFVPRQPHH KHYITFTVDK CGCCSYVGRR 120
  121 GEGPQAISIG KNCDKFGIVV HELGHVVGFW HEHTRPDRDM YVDIFYKSIQ TGQDYNFEKS 180
  181 KPEEVDSLGE PYDFSSIMHY ARDTFSRGAF YDTILPKPNS GFRLEIGQRV QLSEGDIRQT 240
  241 KKLYKCAECG GTLMQESGNL AIQHAGVCTW HIISPQGHTI FLNITGGLKL IIMIIFLTDE 300
  301 KLEDLTEIFK PNILKKNQTY LHWKTFLIYY TNSFFHFEIL DRICGGDSLF RTIASSGNRM 360
  361 LIQVRSSTPA ASLPFATYYA ICGGPIYANE GVIHSPKYPE SYPPNSDCQW TIHVDENSQV 420
  421 AIEFVYFHLE QHKECIYDRL ILTEGISKNS KKDGKEMSET FCGLIEKKTI VSKTNQISLR 480
  481 FFSDNSVQKT GFELRFTKEL NECATDKNIC HHYCVNTVGG FKCACRVGYS LSSNGFSCDS 540
  541 TCGGYLKASN GSISSPNFPE MYPNSKTCIW EIEAPDGYHI FLNFTKFNVE GMKTECAYDY 600
  601 VKIGDSEKLC GEYHEALLFT TPRNRVRIEF SSDSSVERDG FFANFIADFD ECQNDNAGCE 660
  661 HTCQNRLGSY VCTCNPGYIL AEDKHNCKEG SCFFEVNAPA GDINSPNYPN DYPKGQNCSW 720
  721 HFVTTPGHRL MLTFSSFQVE EHAQCKYDAV SVYDGGDGSA QLAGVFCGLA PPPLLLSSSN 780
  781 ELYLTFSSDA SVSRRGFQAH YTSLCGGRLT AESTPGHIYS HATFSDSKYG KNQDCSWIVR 840
  841 AKSPGRGVRI QFSTFNIESE EGCQYDYIEI YDGPEATLER LVGRFCGDTS PEVITSTGPE 900
  901 LLLIMHTDNA EEEKGFVAEY REAPRSSSTK RTFVSKTRHS PLEEPIHDRN E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle