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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: daf-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIRHVVFCL LALVYGAETS DDDLDERTNI FIRDKLIPAL KLAEVTKVNF TRLHLCHCSR  60
   61 EVGCNARTTG WVPGIEFLNE TDRSFYENTC YTDGSCYQSA RPSPEISHFG CMDEKSVTDE 120
  121 TEFHDTAAKV CTNNTKDPHA TVWICCDKGN FCANETIIHL APGPQQSSTW LILTILALLT 180
  181 FIVLLGIAIF LTRKSWEAKF DWYIRFKPKP GDPLRETENN VPMVTMGDGA GSSVPEVAPI 240
  241 EQQGSTMSTS AGNSFPPGIM PNNMKDMLDV LEETSGSGMG PTTLHKLTIG GQIRLTGRVG 300
  301 SGRFGNVSRG DYRGEAVAVK VFNALDEPAF HKETEIFETR MLRHPNVLRY IGSDRVDTGF 360
  361 VTELWLVTEY HPSGSLHDFL LENTVNIETY YNLMRSTASG LAFLHNQIGG SKESNKPAMA 420
  421 HRDIKSKNIM VKNDLTCAIG DLGLSLSKPE DAASDIIANE NYKCGTRYLA PEILNSTMQF 480
  481 TVFESYQCAD VYSFSLVMWE TLCRCEDGDV LPREAATVIP YIEWTDRDPQ DAQMFDVVCT 540
  541 RRLRPTENPL WKDHPEMKHI MEIIKTCWNG NPSARFTSYI CRKRMDERQQ LLLDKKAKAV 600
  601 AQTAGVTVQD RKILGPQKPK DESPANGAPR IVQKEIDRED EQENWRETAK TPNGHISSND 660
  661 DSSRPLLG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle