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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ptr-4
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSDYGKQF EDWMQKVFFK YGIFVAKHQF WFLIVPLALT VLSIPGLFYL QINLDLYRLF  60
   61 VPTDAPVRYE FERTKDFNSL SQGDLSLTPK RNRREFDCED GSCFLPDVEM DRLKRDLQAL 120
  121 EDEARLDVPF GNASSMARYK RDVNKDKEKK ERERKLIPAK HDILRFYVVH RKFDNLLQSK 180
  181 YLGPLFQFTQ DMMKVTNEFE DEVWGLEDFC TKDPGSASCN NNLNLWIKHA DVLFKDGKIK 240
  241 ANPNLQLSYP VLYLFNRPKD IGNVIYGVDV KGEKNEIQGA RVLTIHWFVN YPATAENNRA 300
  301 YYAYRQKLNE YWESISENID LQFIPHNDKA MDDEMLEIIK TTVPFAFPAT ILLTIFVLSA 360
  361 NYSSDRTKSK PIEMCVGVWC VIFALIITFG VFFFFGAKFN PVTSTMPFLV LAVGVDDDFL 420
  421 MMAAWRECDR KHSPAIRLGF VMADAGASIT VTSFTNFFCF FLGWFMCSTP AVADFCIITA 480
  481 AGVFFDYLMQ ITFYAAILKY SGDREETGGL ASCCYKKNDD DDEDVETQRE QREQSEAAKE 540
  541 KEENIDFAHH EKTLDLPYMH QFFRDTFAPF VMKKWVRVAS LALFPIYTAF AIYGCSILRV 600
  601 DISPVKYIRD NSPIQTFVAL ADKYIWADNV MPNFHIMSPP DLRDEGARNR LNELVYKLES 660
  661 TKYSIGRVST NLWVWQYQQY LNDFPHINYT SDFYDRKNLR EFFSQLDYSQ YRDKVKILDN 720
  721 VTNGEPCISA FSFQTSFYGL DSWDKRQSEL FYWRDILKEF PEFDMFLSGI FSPFLIDQRH 780
  781 TIAPSSMQTI GSALAMMALI SFFFLPDAQS VFLMTFSLLS ISMGVCGGLA LLGSDLDSVS 840
  841 MGCIVMAIGL AVDYSVHICY RYHRSEYKTA QEKVADTLAS VGWPVTQAVC STLVGLAITV 900
  901 FVPAYLVRVF FQTVYLVNII GLFHALVWLP QLISALDPCE RVPLRERDSL ISKHIPLSLH 960
  961 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle