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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE30858
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVDQLVETI IPYNLRSIAT HLYVPPFTII TAIWTYVWLN IFGYEEYYEL GMLGYAAIFV  60
   61 ILALVLLFCH WMMPVRCFLM CSKQEDVRIA SHVCVIPTQN NGWPELVKLM RTTRDKQTKL 120
  121 WFEFQRVHYT WDEESREFQT KTLDTAKPMV FFQKSHGFEV EEHVKDAKYL LGDNKTEMIV 180
  181 PQFLEMFIER ATAPFFVFQV FCVGLWCLED MWYYSLFTLF MLMTFEATLV KQQMKNMSEI 240
  241 RNMGNKTYMI NVLRGKKWQK IKIEELVAGD IVSIGRGAEE ECVPCDLLLL RGPCIVDESM 300
  301 LTGESVPQMK EPIEDVEKDK IFDIETDSRL HVIFGGTKIV QHTAPGKAAE GMVKSPDGNC 360
  361 ICYVIRTGFN TSQGKLLRTI MFGVKKATAN NLETFCFILF LLIFAIAAAA YLWIKGSVDE 420
  421 TRSKYKLFLE CTLILTSVIP PELPIELSLA VNSSLMALQK LGIFCTEPFR IPFAGKVDIC 480
  481 CFDKTGTLTT DNLVVEGVAL NNQKEGMIRN AEDLPHESLQ VLASCHSLVR FEEDLVGDPL 540
  541 EKACLSWCGW NLTKGDAVMP PKTAAKGISG IKIFHRYHFS SAMKRMTVVA GYQSPGTSDT 600
  601 TFIVAVKGAP EVLRNMYADL PSDYDETYTR LTRQGSRVLA MGIRKLGETR VGELRDKKRE 660
  661 NFENDLAFAG FVVISCPLKS DTKTMIREIM DSSHVVAMIT GDNPLTACHV SKVLKFTKKS 720
  721 LPTLVLDEPA DGVDWMWKSV DGTIELPLKP ETKNKMERKA FFNSHEFCLT GSAFHHLVHN 780
  781 EHTFLRELIL HVKVFARMAP KQKERIINEL KSLGKVTLMC GDGTNDVGAL KHANVGVALL 840
  841 TNPYDAEKAA EKEKEKKAKI EEARSLVRSG AQLPQRPGAP GAPPAANAAR RDAPPGARAR 900
  901 APLPPMANAA QARLDNLMKE LEEEEKAQVI KLGDASIAAP FTSKYTSIAS ICHVIKQGRC 960
  961 TLVTTLQMFK ILALNALVSA YSLSALYLDG VKFSDTQATI QGLLLAACFL FISKSKPLKT1020
 1021 LSRQRPMANI FNAYTLLTVT LQFIVHFSCL LYIVGLAHEA NTEKAPVDLE AKFTPNILNT1080
 1081 TVYIISMALQ VCTFAVNYRG RPFMESLFEN KAMLYSIMFS GGAVFTLASG QATDLMIQFE1140
 1141 LVVLPEALRN ALLMCVTADL VICYIIDRGL NFLLGDMF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle