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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: nhr-35
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNKIHAGFT FTPSHARSLD CFVCLLVLFS FRSTPPHGRH PAIEPTLLIS HYYRGQMLGT  60
   61 YNGDSKAETD GKDNSICHIC SDVATGRHYG AIACNGCKGF FRRTVRRNYE YHCRFESKCE 120
  121 IDKHNRAVCR YCRFMKCISS GMRDDQVQSE RDVIGKREKK DNMKTYCQDP TPRTSPELTM 180
  181 SPVEDEYDQL LESLLKSEMT IQSLRDTVIT QTGNVEYTTK SKNRLSHTDR TATLNDVLKS 240
  241 MHSQLLLVIE WAKTLPEFKQ LSGADQAVLL KNFAGQHVTL CVAYRSVGAN DALKLLNDLY 300
  301 IPRASKTTPH LKEYVDGFYL RDCEKVMDQL VEPMRFLKLD NKEFVALKAC VLFNPVAPGL 360
  361 SNHAVNLVLN ARRKIFAAFE KYVRVNKPLE TTRVGDLTFF ILTPLSVLSK SISEDIMFTK 420
  421 VSGVARIDVL MEELILAETD YGEDRQDQTP CSIMNDTPSG SQDMCSPCPE DLLRTSTSSN 480
  481 SPTNSSLTAG LLLKTDDAMM SGIGTQYTTP QPHTPQFADS SHLNLPYAPF TSSYNQYPNT 540
  541 YS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle