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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: glr-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.43
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSSFSFLNM FGVLFTVFNL TVVQPYPSHI IIKSFGNNEE VSRVALKAME YTSDHINSRD  60
   61 DVPFKLAFDH RVVEEGAAVS WNMVNAVCDE LKEGAMALLS SVDGKGREGI RGVSDALEMP 120
  121 LVSLTALSND DHQQQQFGNL FEVSVRPPIS ELLADFIVHK GWGEVLVLID PVHASLHLPS 180
  181 LWRHLRTRTN TSVKASMFDL PADEKQFEAY LMQFNMMRNN ETNRILIDCA SPKRLKKLLI 240
  241 NIRSAQFNQA NYHYVLANYD FLPYDQEMFQ NGNINISGFN IINKDGREYW SLKKHLKTSS 300
  301 SLGGGDDVSV EAAVGHDAML VTWHGFAKCL QANDSLFHGT FRHRRFFNRG FPGIYCDPLS 360
  361 DRSHPNRPFS SFEHGKTIGV AFRNMKIGHK EGTLTGNIEF DRFGNRKNFD VSIVDLVSNT 420
  421 KATFNSKEVL AWRQGVGFFS NRTVAQHSRK SQNDHKDNQV IVLTNLVAPF VMIKRECLEM 480
  481 ANLTECQGNN KFEGFCIDLL KLLADKIEEF NYEIKLGTKA GSKQADGSWD GMIGELLSGR 540
  541 AHAVVASLTI NQERERVVDF SKPFMTTGIS IMIKKPDKQE FSVFSFMQPL STEIWMYIIF 600
  601 AYIGVSVVIF LVSRFSPYEW RVEETSRGGF TISNDFSVYN CLWFTLAAFM QQGTDILPRS 660
  661 ISGRIASSAW WFFTMIIVSS YTANLAAFLT LEKMQAPIES VEDLAKQSKI KYGIQGGGST 720
  721 ASFFKYSSVQ IYQRMWRYME SQVPPVFVAS YAEGIERVRS HKGRYAFLLE ATANEYENTR 780
  781 KPCDTMKVGA NLNSIGYGIA TPFGSDWKDH INLAILALQE RGELKKLENK WWYDRGQCDA 840
  841 GITVDGSSAS LNLSKVAGIF YILMGGMVIS MLAALGEFLY RSRIEARKSN SNSMVANFAK 900
  901 NLKSALSSQL RLSVEGGAVA QPGSQSHNAI RRQQVAAFLP ANEKEAFNNV DRPANTLYNT 960
  961 AV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle