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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE30854
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILRSLLLIV IFHVTWCQIG QPGQAPGQVP LDPGYRQPLE PIKNVLQGAY GSNITLYYRN  60
   61 SPYRVMGDLT VEYGVTMDIE TGTRIYFDTG VGLIVKGTLR AIGNEFAHIE MLPYQQQINY 120
  121 DSEMPNFRLV DGPTVRQGRL QVQFRDRWRS VCTMVTNWTS IDTGTACRSM GYSDGGFWKW 180
  181 FRRNNDTYPF VMPKPDCHGA AKNLWDCPAF SNPQKIRLSE NLCQGEDDIG IYCWGPPTFT 240
  241 GWARHWKGIQ ILNSPFHYVN SDPDLVAVNR ESDSRLEFVD ILYAGYDGVN KNTTSALYIE 300
  301 GVPPIMNGLR IEHSARDGLQ LLDANGPAII ANSTFSYNRG HGISVVNTTD ARIFINNTKI 360
  361 QGNWGDGIWY KQQTGVNLID YGMRERRSIG SGRLEEQKPR IDMCAEHRVD DNHFFPHLIA 420
  421 VNLKNRTYLD LAQPAICWMT VSLPPRLPYT YSIQWLHIRD RNPQTARTTL LVCDSNNVDE 480
  481 NSCSTPRFRI PIRNEIFPQS ISLKSSGKPL YLALEHVLDG DQAGYVQGDV HLLFNIHASV 540
  541 LDKAYYGLNV TNCIIEKNTG NGVFANDIRE RTALTNVTLD ENQGYAGFLV KDGAADIWLN 600
  601 ETRILNNWGD GMNISYAGGS IMVNGTRIEK NRWRGAAIHY NQTLPFLPMY NEVIFKGRPS 660
  661 NNKFYLPTII SENEWGGLLV GNFCAYSNES NWHSKYRIPI NSVYPKLVPK ILISWVEFLK 720
  721 NQYHPSMEIF SCRDPDVIWN IVDVTGNRID GNLGYGMRIA PAVNMHTVIN SNQFLHNNDT 780
  781 TLYIRNAQWP ELGDLPAEVT ISKNVFKFNV AKYIISIGMN EDAPRQFLTF NQQNEIRANT 840
  841 VFDPFPSLPP RSTPYAALVV SSSNVKIHRN CFNNERSKYE IATELEQHAK WIDARENNWG 900
  901 FQEIPRFIDK FFDQFNRYSL ASIDIEPYMA ACNQRMPYIT LLNGAFRQFK KQSEPFKLGG 960
  961 IIYENHDLLK GRYQVTEDLQ VVPGAKLTIA SGSVLEFQHG IGMLVQGDLI RNEYDQDEKV1020
 1021 IFTSTPFTLE RRSDIRLVDV DGNYEVTEGR LEVLVDDQWG TVCNRSWTPQ LTILACNQLG1080
 1081 LVADVQYFEN WRIFPEPGDL PMIMDNIRCE ENEVDITKCR HDGVERNCAA GCRSTEVVGL1140
 1141 RCLEPRWAGV RYSLLANPPT VTGQTTMDNW RIEKGGLFNF RTSEFCAAFK VDWNYHTFHR1200
 1201 LEIRNNFWDG IDVVYNDLVK KPAIRNSVIY NNRRNGFHIR SAGITVENVT INFNGQSGMR1260
 1261 YNPSLSALEQ NDIVSWLSLK EQPELEANNI FRIPDQQLDL IEVMESNLNQ RKFLVAAETQ1320
 1321 DCPADPHQEC VYNLMIRSVG YQYGLASKMA IQIVNAPSNV SDEDAIFTEV STGKSWSARK1380
 1381 DQVYFPVVST ENAMRMRYTR SFGKPKLVIL VLFLDTQEYV DRFIHLYKSR VEDNQYGFSS1440
 1441 VHYSNLTYSD GRLSNRWNNE KIWLQKVNFT RNSEAVMWLH SPQHAVVPGT PIAEITYHFD1500
 1501 NCSVTDNSGP IIESHRDLYA SANVFHWILW SNTFANNSRS GIAVALPDTY DLLAKQTHSF1560
 1561 WLTENRFERN SEFKILLDGY YAFANISSNN FTLNTAPKQF GMVELRGMEK NLICERNRFF1620
 1621 FNWGHWMIKL DATSQYLRQI DVPSYVQYNY IEKNRFINQR GDYVDMWPRS YALGVFGSQK1680
 1681 VEVHFNRFFN ELIDFELVSG AKYSDVFETM NTTHNWWGTG NEAVIAQRVF DFDDWNTFTR1740
 1741 AEWTPFYVSN DLSINFWWNP WRDGQLANAT YLEPGVHDLH GRVYEDKNLT LITERWYSFP1800
 1801 YNYRPFRPYR ITRDVTIMPG ATLYIEQNVE VHVWPNVRIL VLGNLVARGE YWQPIRFKPI1860
 1861 NVTEYMQYKG EIPTEYRKKR GIEWPEKSQR HAGYAHLAGP NGPFVIKGTS GNSKLSDHLE1920
 1921 RTKRHDCQWP ENPNHPHESI HPDTPNGPYR LKGLKQERPK RASDRSKPDL VYRDFPTLHR1980
 1981 DDPYYQRFTV SLTTNGSDYG RAGFIQIYNA TTGEVVPSCD RQFTIRNAQV VCRELGLQTQ2040
 2041 NVYHWLTPRW DYNPHVRILK TYMEPRQCRG DEPSLDRCDL RLSGNDSQWM CMDSEHFNYV2100
 2101 YCGSNRSLSR DYIGNWGGIT FAQPNLEHAY GEKSGAKKEK SILQYVEIVG GGAGHKDSWQ2160
 2161 SAGLQVFHRS PILDHINVTN CSVHGIQVIS PNDRITLANL NVTFNQGQGV NILTTFVQAP2220
 2221 SSSQNAMRKP MSIPYYTQGM LDMCAARKRF EVENRIMLYY KYDSYPVDCV KVFTSRGRRV2280
 2281 AFRIVQYQLY SSPTDLGRSD ALRLYSSESF APMALLADFR SDYQSVDPSV AVTSDEIAVH2340
 2341 LRATAADGVY GFIAEVSALP SNAEQHTVGE IIIRGSRVDH NDRGAIEYSN LGEMSPNLVI2400
 2401 ESSSFAFNGI HLFGNISTSS QAVQLNLHNT VFFLFRANSI AHNRGGLYIS ATSSSPVVRL2460
 2461 GALIKNCLFA YNSNSTALAL SGNNYQVITL LNNIISHNFA LYHDTIVAHD VAINMTRNTL2520
 2521 FSNTGLHTLD IHANSKLSVD KNTFFYNNFY DNLALGHGQQ YLEMYGYQPA KENNEFFNRP2580
 2581 RRDLVKRQVL TQQGVSFDWW THVDNETTRY RSTIIAGSSQ EVFKFNTFND PLNDYELTTG2640
 2641 RQSPYEMGSI DAKENYWGYP GTVGVAAGKI RDHEDYPGLV KVDFTPVLES NTSLIEGDCP2700
 2701 AGWFQAGHEE FKSCFLFVPS AVTFSRAVEY CEELDAFVPY LRINDILQSQ LAQRIEKFSI2760
 2761 DLRTDQERLK PYGMDDDIPV WISAVNIPNT QCGWLRSRSK KIEQANCNLL TAFICEKGTH2820
 2821 PYSEPILWRP GIIIPIILAA VILFLLVILL ICWCVKSRKR NDLLGERKEN IRASMRLQKL2880
 2881 HQEHEKREMK RGSDHTHTSG HASLNSGSTV SAYSGRAIHR PPAYQSDTLS TATSENTYSY2940
 2941 AYTPHGGPTA SYNTRPSRSV STNPNGYSEI THPTVTQTTT TVPYRSTSSP NNHVRMRPYQ3000
 3001 PRSDTASNAT LSYTTDSERT STATDLSSSY TSDASESTVQ STVVNKRRSP QPPVSPIPRA3060
 3061 PPLRNSNGFL ASTNNFQPLP TDIPMRSDPE LNHFVELHAA PRTGGSIRFK KPAMETSM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle