YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: glr-4
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEKCRLVRG FSILLVIFYI ANSAADDRFH IGTIANRGSF AYEHLRYAID RWNTEHGAHT  60
   61 QIKFSIVSPI RYDNNYEERM CEIMQQGIVA VVLSNEESEQ DSQLIKSMCH YFNIPCLSLQ 120
  121 STSLRDSVSD FVTLLGPSRG AGARATSEFL DSMRWTGFLL AYQHGSDLED LSPLMQYKQI 180
  181 VDTGGRRIHI KIRRLPNNTD DYEPFLKYVK TRLKQTNIII HSNNITVLYN LLQQARGLNM 240
  241 AEPPFSYVFT NTDLSLLEDF LNNMYGASFH CNITGLQLVK NDPMMKTQLA LTSEAVYVVG 300
  301 MSIYRMRELG HAPRQSSIMC DSHDIWSDGR IMNEGIRKLK LRNQLTGDVQ FKSNGERDDI 360
  361 MYHGVGRINS QFVKLGNWSE KRGWNFDSRY ANRWEFDIDP DSEDLEGLHL RVVVYLEEPF 420
  421 VIKTGENQYE GFCIDLLNEM TQVLKFNYTI IEVQDGTYGI EDESGRWNGI IGALQRHEAD 480
  481 LSLSAVTITY SRAEVVDFTL PFMHLGISIL LARTSEETDK GSLWTFLEPL SLTVWISLLI 540
  541 SYCIVSYSMH ILAKFSPYEW YNLERIDERD FENIKNQKNQ FTVLNSFWFT MGSLMQQGSD 600
  601 VIPRAAATRL IAVVWWMFTQ IIISSYTAQL AAFLTVERMS TPIESTQDLA NQQKIRYGVL 660
  661 KSGSTMDFFR ESKIPMYERM WSVMESSSPG VFVNSSREGI ARVKSGGYAY MMESSMLEYY 720
  721 LERDCELQSI GGLLDSKGYG IALPKGSPLR DILSRTVLQL QERTILEALK NKWWRDRREG 780
  781 PSCGPPPSEK ATNSKPQNIF GIFYVLLTGL IVAFLLACGE YCIESRHEAF RLKLTIVGKF 840
  841 MDWYRGNSND SKQRSKLRNM QLDTAGQEVS ISTRHDPPTP PQPALTSRPD PTRLSISSPA 900
  901 PTICVVSCDD GTPISRDRPP SISRAGLRRL SRMLPAATHE QLSRFRQGSM S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle