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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ida-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFFHSIIVL LFSISTGSAF LLYGCNLSEN LCDNDESCYP DGVFGQCYSS ESGSPEPTVL  60
   61 DNLDDTQLEL LKLELTRLAA KDKDWGDEET QCVLAYFKMS MFYQLQYDPD FCQVRKPANV 120
  121 WALIQLIDTG LTEDPTILDE DVNPENVTDE DMAQIIEQLK EPSLPTEEDI EEALNAQNED 180
  181 VDDEILDQYV QAVVNNENPD FSELSDGQLN ILIGRLVDLK KNVENEEAQL LTGDGEQEMA 240
  241 VPLDDLEERG EQAILKKDIE QVGEINQGLD NTEHKIVKGR KDQVVTRVDA NRVYLKVHLK 300
  301 NEDQLMPLIE FLQNTIAIPN NLYFDDFQFE NGQLSMRISR FEGAKPKADK RIDSVEGVAS 360
  361 AVYKRRKDIA RLSGADVRET GIGSGEDGSL PVESSERDWL LMPVLFVCAF TVTALGLVAA 420
  421 VQIARSRRHY KDNIQQIAEQ LDGKNSFAYQ DLCRQRADGG RASKSSSTSS WCEETAVPTI 480
  481 DISTGHVVLN FLQEYLSEPT KIEAQWNGIK DYRNEERTKT KAEKFASQNR TILPFDDNIV 540
  541 DIDGKTAENE DFYLNASFIY DDDPRQAVYI AAQTPASSQI AAFWQTIWQH GVCLVVNLST 600
  601 PEECKQEKNY WPDTGSEVHG AFEIHLVSEH IWSDDYLVRS FYLKNLQNSQ TRTITQFHYL 660
  661 SWQKESTPTS AKSILEFRRK VNKSYRGRSS AVLVHSWDGS GRTGVYCAVD VLCARLLRGI 720
  721 RQIDVVATVE HLRDQRDGMV ATGDQFKLVY GCVAQEVNHL LKSIATK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle