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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: lgc-46
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYLQFLSLV VLLLMCHARK SVYRRNSPSL RRLTRNYDWE VDEHGGLKPI INPAKVERAT  60
   61 KNCANDSFIL GTIMSNYNRH KIPGGQVDVE VEVWVQEITT ISDITSDFQL DIYIYETWYD 120
  121 PALNYAFMNP CKYNLSLNSV LLEKLWTPNS CFINSKTADI HKSPFPNIFL MIYANGTVWT 180
  181 NYRLKLQGPC IMDLTKFPFD NVTCSLTFES FNYNTDEVKM DWSVNGVQKM RDKMELADYE 240
  241 LVDIHKIRTT EEYPAGYWHE LTMSFEFKRR AGWYILQAYL PTYLTICISW ISFALGSKAI 300
  301 PARTMLGVNS LLAMTFQFGN IIRNLPRVSY VKAIDVWMLS CMTFVFCSLL ELAWVGYLSR 360
  361 EEEPTSAKCL QPSAQVAPKP CHPPPVQQNA NNSSVHRRQK QPKNEEESAL LSLRDNDYGY 420
  421 IPPGFGLNGN VANAMKSFSS SCSCEPTNVV NLMLDEAETI PTSTSSSLSR KQRREILAHK 480
  481 IDSVSVFMFP FLFVLFNIAY WQHYLRGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle