YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE30219
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHASRSLIR TSSDLHTSIR NSSSTKHVFA CVLGSGVAGS SVAYHLTKRN IKDVLLLERA  60
   61 SGVASPSGTS FHSPGLVSAS HPAHRYKPIL AHSIELYSKL EAETGVNIDF QPTGTIRLAT 120
  121 NETRLAEFRK YVNRDYYKEG DVCKTTLLTP DQVRELAPDV DHSKILGALH TTNDGTISAR 180
  181 ALTQALVVGA KNGGAQVIDG AIPKEIKYDK EKGHWIIALE DGTLVTTRNL INAGGIWAND 240
  241 IARLSGHALP VVVVEHQYAV LTPNKTPGPT PAIIDHDSTF YVRKSGDDYL FGGFESLEKT 300
  301 VIREDWYKKG VPTEGSKSIQ ADFSRLDDAY KRACDLIPGL QGSKVDARAA VFSMTPDGYP 360
  361 LVGPYDKNYW MSTGFLDGVS SGGGIGKYLA DWIVDGEPPA ELFDTDASRY ERWGDRKFFT 420
  421 ERSRETYSMY YNWSYTDRSA GRPTDRISGV YGRLKKDGAS FSFRNGWEVA NSFNMGVQNE 480
  481 EYLPTLIREY EMVTNKCGVI DLSWKGKIEV KGNDAEKLMD YAIASQIPAL GKISSGLMLT 540
  541 RHGGILGPMM IFHHDRQRSA FILLTEPERE SRDLYWLRRA AAEKKFDVQV SIVSEYLASL 600
  601 ALVGPKSREV LSALTKSDVS DEGFPQKSTR MIRLGPVGVV CARSSTSTGQ LSYELFHNRA 660
  661 ETAKLYNAVM SAGREHGIVN FGQAALNMMR LEHGYKIWGK ELTLDTNPFE CGIGGLVDFE 720
  721 KKEFIGRESA LELKKKDFDR RLALITFDTE EGCVLDDRYV PSGNEVIRID GKEARVGQIT 780
  781 SGAYNVRLQK PIAFAWIDNA VGKNERLVVD IGDKRLFATS LETPTIPPIQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle